Zhou Lab
of
Population Genomics and Multi-Omics
Projects
Genetically supported multi-omics biomarkers for drug discovery
- We will identify causal circulating proteins and metabolites for diseases, using genetic epidemiological methods including Mendelian randomization (MR), statistical colocalization and PRS.
- We will explore and develop novel statistical methods for MR and colocalization that incorporates the evidence of pQTL/sQTL/eQTL and mQTL/sQTL/eQTL.
Ancestry specific proteogenomic signatures of complex diseases and traits
- We will perform multi-ancestry proteomics GWAS, identify ancestry specific pQTLs, generate protein polygenic risk scores (PRS) and assess the role of rare coding variants for protein quantity
- We will develop frameworks combining population genetics and post-GWAS methods mapping evolutionary important regions → population specific variants → gene → protein → pathways → disease
Neurological manifestations of post-acute sequelae SARS-CoV-2 infection (PASC)
- A high percentage of people with COVID-19 reported PASC, among PASC symptoms, long term neurological manifestations are the most impactful, with the most severe effects in cognition, memory problems and Alzheimer’s disease.
- Supported by large genomics and multi-omics datasets from BQC19 (Banque québécoise de la COVID-19), CLSA (Canadian Longitudinal Study on Aging), UK Biobank, and collaborating with international COVID-19 cohorts, we will study the genetic determinants of neurological manifestations of PASC.
- Our recent COVID-19 publication in Nature Medicine.
Genomic architecture of Arctic indigenous populations
- To increase the diversity of genomic research in underrepresented populations, we will generate whole genome sequencing data of an Arctic indigenous populations (Nunavik Inuit), following our previous publication.
- We aim to characterize founder, admixture, introgression and natural selection events of Nunavik Inuit, some of which may contribute to certain disease risks, the findings will advance our knowledge of the population and better serve the community.
Our Team
Our newly established Population Genomics and Multi-Omics lab (since 2022) is under the umbrella
of McGill Canada Excellence Research Chair (CERC) in Genomic Medicine. We enjoy rich resources
and close connection with other CERC members, including the labs of Computational Genomics and
Functional Genomics. We are located in the Genome
Building of the world leading McGill University.
Sirui Zhou is an Assistant Professor in the Departments of
Human Genetics and Quantitative Life Science at McGill University. She received her MSc from the
Chinese Academy of Medical Sciences & Peking Union Medical College and PhD from Université
de
Montréal. She was a CIHR postdoctoral fellow in Genetic Epidemiology at the Lady Davis
Institute.
Her research focus is using large scale genomics and multi-omics data to explore ancestry
specific
determinants of complex diseases. Her primary interests are immune related diseases and
cerebrovascular disease.
Susannah Selber-Hnatiw is a doctoral student in the
department of Human Genetics. She obtained her M.Sc. from Concordia University in 2022, studying
the production and modification of secondary metabolites in Aspergillus niger. She is passionate
about rational drug design and her doctoral research will focus on identifying disease
biomarkers that can be used for the development of novel therapeutics.
Publications
Open Positions
-
PhD or MSc in Human Genetics or PhD in Quantitative Life Science
-
Postdoctoral fellow
We are looking for a motivated researcher with strong background in quantitative
analysis/computational
biology/biostatistics/bioinformatics.
- PhD in Human Genetics, Genetic Epidemiology, Population Genetics, Statistical Genetics or related field.
- Experience in bioinformatics and programming skills is required.
- Familiar with Linux environment, shell scripting and command-line software.
- Demonstrated proficiency in R is required.
- Demonstrated proficiency in Python is an asset.
- Familiar with cloud computing is an asset.
- Experience working with large scale human genomic and multi-omics dataset is an asset.
- Experience in population and evolutionary genetics is an asset.
Zhou Lab
Contact
Sirui Zhou, PhD
Canada Excellence Research Chair in Genomic Medicine
Assistant Professor, Departments of Human Genetics and Quantitative Life Science
Email: sirui.zhou@mcgill.ca
Phone: (514) 398-8364
740 Dr Penfield Ave, Room 7101
Montréal, Québec, Canada, H3A 1A4